Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS24210 | Not Available | - | 4340895 - 4341176 | 11229.3 |
| excinuclease abc subunit uvrb | EBF16_RS24215 | Not Available | - | 4341285 - 4343468 | 81663.1 |
| hypothetical protein | EBF16_RS24220 | Not Available | - | 4343519 - 4343944 | 16118.0 |
| dna/rna non-specific endonuclease | EBF16_RS24225 | Not Available | - | 4343934 - 4344950 | 37782.1 |
| duf3617 domain-containing protein | EBF16_RS24230 | Not Available | + | 4345161 - 4345727 | 20096.9 |
| hypothetical protein | EBF16_RS24235 | Not Available | + | 4345724 - 4346674 | 33853.4 |
| hnh endonuclease | EBF16_RS24240 | Not Available | + | 4346677 - 4346964 | 10555.8 |
| duf3617 domain-containing protein | EBF16_RS24245 | Not Available | + | 4347045 - 4347551 | 17458.7 |
| hpp family protein | EBF16_RS24250 | Not Available | - | 4347577 - 4348257 | 23347.9 |
| mbl fold metallo-hydrolase | EBF16_RS24255 | Not Available | - | 4348359 - 4349576 | 44959.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.