Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | EBF16_RS24160 | Not Available | + | 4333262 - 4334866 | 58840.1 |
| 2og-fe(ii) oxygenase | EBF16_RS24165 | Not Available | - | 4334902 - 4335609 | 26311.0 |
| class i sam-dependent methyltransferase | EBF16_RS24170 | Not Available | - | 4335638 - 4336393 | 27403.9 |
| hypothetical protein | EBF16_RS24175 | Not Available | + | 4336616 - 4336915 | 10531.6 |
| hypothetical protein | EBF16_RS24180 | Not Available | + | 4337021 - 4337695 | 24034.1 |
| rap1a/tai family immunity protein | EBF16_RS24185 | Not Available | + | 4337706 - 4338122 | 14870.8 |
| nucleoside hydrolase | EBF16_RS24190 | Not Available | - | 4338126 - 4339262 | 41430.9 |
| prolyl aminopeptidase | EBF16_RS24195 | Not Available | + | 4339313 - 4340254 | 34834.1 |
| hypothetical protein | EBF16_RS24200 | Not Available | + | 4340278 - 4340592 | 10831.0 |
| higa family addiction module antitoxin | EBF16_RS24205 | Not Available | - | 4340600 - 4340920 | 11779.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.