Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin-binding protein | EBF16_RS24110 | Not Available | - | 4320659 - 4321405 | 27877.6 |
| cytochrome b/b6 domain-containing protein | EBF16_RS24115 | Not Available | - | 4321402 - 4322091 | 26258.5 |
| outer membrane protein | EBF16_RS24120 | Not Available | + | 4322382 - 4322942 | 19652.3 |
| outer membrane protein | EBF16_RS24125 | Not Available | + | 4323269 - 4323778 | 17495.3 |
| hypothetical protein | EBF16_RS24130 | Not Available | - | 4323831 - 4324253 | 15526.4 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | EBF16_RS24135 | Not Available | - | 4324337 - 4325596 | 46568.3 |
| hypothetical protein | EBF16_RS24140 | Not Available | - | 4325645 - 4326148 | 17485.0 |
| dna polymerase iii subunit beta | EBF16_RS24145 | Not Available | + | 4326320 - 4327432 | 40082.2 |
| eal domain-containing protein | EBF16_RS24150 | Not Available | + | 4327523 - 4330120 | 94009.2 |
| tonb-dependent receptor | EBF16_RS24155 | Not Available | - | 4330164 - 4333037 | 100106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.