Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | EBF16_RS24060 | Not Available | - | 4313627 - 4314019 | 14187.7 |
| hypothetical protein | EBF16_RS24065 | Not Available | + | 4314120 - 4314626 | 17888.4 |
| dna replication/repair protein recf | EBF16_RS24070 | Not Available | + | 4314667 - 4315740 | 38111.6 |
| chap domain-containing protein | EBF16_RS24075 | Not Available | + | 4315848 - 4316381 | 18934.4 |
| chap domain-containing protein | EBF16_RS24080 | Not Available | + | 4316462 - 4317217 | 26996.3 |
| duf3297 family protein | EBF16_RS24085 | Not Available | - | 4317256 - 4317525 | 10005.6 |
| s1 family peptidase | EBF16_RS24090 | Not Available | - | 4317582 - 4318412 | 29364.0 |
| duf350 domain-containing protein | EBF16_RS24095 | Not Available | - | 4318417 - 4318839 | 14501.2 |
| hypothetical protein | EBF16_RS24100 | Not Available | - | 4318913 - 4319221 | 12741.9 |
| sam-dependent methyltransferase | EBF16_RS24105 | Not Available | - | 4319385 - 4320626 | 46749.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.