Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s41 family peptidase | EBF16_RS23970 | Not Available | - | 4293869 - 4295224 | 48632.7 |
| hypothetical protein | EBF16_RS28920 | Not Available | + | 4295400 - 4296137 | 27171.7 |
| murein hydrolase activator envc family protein | EBF16_RS23975 | Not Available | - | 4296144 - 4297394 | 44232.5 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | EBF16_RS23980 | Not Available | - | 4297452 - 4297874 | 15724.2 |
| ribosome silencing factor | EBF16_RS23985 | Not Available | - | 4297928 - 4298317 | 13745.3 |
| nicotinate-nucleotide adenylyltransferase | EBF16_RS23990 | Not Available | - | 4298330 - 4298959 | 23922.2 |
| dna recombination protein rmuc | EBF16_RS23995 | Not Available | - | 4299013 - 4300494 | 54041.5 |
| glxa family transcriptional regulator | EBF16_RS24000 | Not Available | - | 4300572 - 4301555 | 35908.0 |
| alpha/beta fold hydrolase | EBF16_RS24005 | Not Available | + | 4301687 - 4302517 | 30475.8 |
| sdr family nad(p)-dependent oxidoreductase | EBF16_RS24010 | Not Available | + | 4302586 - 4303371 | 27316.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.