Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | EBF16_RS23920 | Not Available | - | 4281978 - 4286513 | 164901.0 |
| nad(p)-dependent oxidoreductase | EBF16_RS23925 | Not Available | - | 4286606 - 4288057 | 52277.3 |
| undecaprenyl-diphosphate phosphatase | EBF16_RS23930 | Not Available | - | 4288223 - 4289032 | 29203.9 |
| complex i ndufa9 subunit family protein | EBF16_RS23935 | Not Available | - | 4289216 - 4290145 | 31547.3 |
| tmem165/gdt1 family protein | EBF16_RS23940 | Not Available | - | 4290248 - 4290826 | 20316.6 |
| duf1801 domain-containing protein | EBF16_RS23945 | Not Available | + | 4291062 - 4291478 | 15184.3 |
| hypothetical protein | EBF16_RS23950 | Not Available | - | 4291678 - 4292076 | 14406.3 |
| hypothetical protein | EBF16_RS23955 | Not Available | - | 4292174 - 4292734 | 19769.2 |
| demethoxyubiquinone hydroxylase family protein | EBF16_RS23960 | Not Available | - | 4292750 - 4293304 | 19812.8 |
| disulfide bond formation protein b | EBF16_RS23965 | Not Available | - | 4293301 - 4293795 | 16982.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.