Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | EBF16_RS23475 | Not Available | - | 4187848 - 4189020 | 40586.6 |
| glsb/yeaq/ymge family stress response membrane protein | EBF16_RS23480 | Not Available | + | 4189249 - 4189497 | 8544.9 |
| glsb/yeaq/ymge family stress response membrane protein | EBF16_RS23485 | Not Available | - | 4189558 - 4189815 | 8852.43 |
| duf1153 domain-containing protein | EBF16_RS23490 | Not Available | - | 4190011 - 4190310 | 11332.7 |
| hypothetical protein | EBF16_RS23495 | Not Available | - | 4190418 - 4190714 | 10181.3 |
| trna 2-thiouridine(34) synthase mnma | EBF16_RS23500 | Not Available | + | 4190841 - 4191947 | 39328.1 |
| cyth and chad domain-containing protein | EBF16_RS23505 | Not Available | + | 4192048 - 4193511 | 53752.1 |
| atp phosphoribosyltransferase | EBF16_RS23510 | Not Available | + | 4193578 - 4194240 | 23902.9 |
| histidinol dehydrogenase | EBF16_RS23515 | Not Available | + | 4194230 - 4195516 | 44996.5 |
| transcription antitermination factor nusb | EBF16_RS23520 | Not Available | + | 4195601 - 4196047 | 16635.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.