Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1674 domain-containing protein | EBF16_RS23380 | Not Available | + | 4168927 - 4169100 | 6414.55 |
| hypothetical protein | EBF16_RS23385 | Not Available | + | 4169259 - 4169738 | 17728.5 |
| utp--glucose-1-phosphate uridylyltransferase | EBF16_RS23390 | Not Available | + | 4169828 - 4170706 | 31569.2 |
| hypothetical protein | EBF16_RS29630 | Not Available | - | 4170750 - 4170881 | 4465.83 |
| is5/is1182 family transposase | EBF16_RS23395 | Not Available | - | 4171044 - 4171997 | 34060.5 |
| single-stranded dna-binding protein | EBF16_RS23400 | Not Available | - | 4172027 - 4172653 | 20990.9 |
| ferrous iron transporter b | EBF16_RS23405 | Not Available | - | 4172728 - 4174584 | 65765.4 |
| feoa family protein | EBF16_RS23410 | Not Available | - | 4174581 - 4174838 | 9150.07 |
| coq9 family protein | EBF16_RS23415 | Not Available | - | 4174914 - 4175579 | 24260.4 |
| dmt family transporter | EBF16_RS23420 | Not Available | - | 4175589 - 4176470 | 30693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.