Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis membrane protein copd | EBF16_RS00950 | Not Available | - | 195033 - 195977 | 32605.9 |
| copper homeostasis periplasmic binding protein copc | EBF16_RS00955 | Not Available | - | 195982 - 196359 | 13099.1 |
| hypothetical protein | EBF16_RS00960 | Not Available | + | 196493 - 196765 | 9383.47 |
| periplasmic heavy metal sensor | EBF16_RS00965 | Not Available | + | 196765 - 197205 | 16398.8 |
| rna polymerase sigma factor | EBF16_RS00970 | Not Available | + | 197202 - 197768 | 20739.0 |
| copper resistance system multicopper oxidase | EBF16_RS00975 | Not Available | + | 197835 - 199760 | 69503.4 |
| copper resistance protein b | EBF16_RS00980 | Not Available | + | 199760 - 200908 | 41228.5 |
| duf305 domain-containing protein | EBF16_RS00985 | Not Available | + | 200999 - 201472 | 17642.2 |
| pas domain s-box protein | EBF16_RS00990 | Not Available | + | 201532 - 203067 | 56435.3 |
| response regulator transcription factor | EBF16_RS00995 | Not Available | + | 203057 - 203680 | 22117.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.