Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
94646 bp
Thymine Count
95472 bp
Guanine Count
157580 bp
Cytosine Count
157630 bp
Genome Length
505328 bp
Protein-coding Genes
508 genes
Non-Coding Genes
15 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | EBF16_RS09240 | Not Available | + | 1103643 - 1104140 | 18693.1 |
| 3-hydroxyacyl-coa dehydrogenase | EBF16_RS09245 | Not Available | + | 1104137 - 1105000 | 30760.5 |
| oleate hydratase | EBF16_RS09250 | Not Available | + | 1105028 - 1106794 | 66515.3 |
| heavy metal translocating p-type atpase | EBF16_RS09255 | Not Available | + | 1106962 - 1109325 | 82650.5 |
| is5/is1182 family transposase | EBF16_RS29640 | Not Available | - | 1109369 - 1109458 | 3341.8 |
| hypothetical protein | EBF16_RS09265 | Not Available | - | 1109452 - 1109763 | 11670.2 |
| hypothetical protein | EBF16_RS09270 | Not Available | - | 1109767 - 1110243 | 18201.3 |
| tetr/acrr family transcriptional regulator | EBF16_RS09275 | Not Available | + | 1110400 - 1111038 | 23031.8 |
| organic hydroperoxide resistance protein | EBF16_RS09280 | Not Available | + | 1111052 - 1111462 | 14340.0 |
| zinc-binding dehydrogenase | EBF16_RS09285 | Not Available | + | 1111472 - 1112449 | 33410.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.