Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | EBF16_RS09050 | Not Available | + | 1065266 - 1065997 | 27461.7 |
| is66 family transposase | EBF16_RS09055 | Not Available | - | 1066367 - 1067935 | 56881.2 |
| is66 family insertion sequence element accessory protein tnpb | EBF16_RS09060 | Not Available | - | 1068003 - 1068356 | 12832.0 |
| is66-like element accessory protein tnpa | EBF16_RS09065 | Not Available | - | 1068353 - 1068775 | 14945.7 |
| hypothetical protein | EBF16_RS09070 | Not Available | + | 1068883 - 1069077 | 6912.67 |
| merr family transcriptional regulator | EBF16_RS09075 | Not Available | - | 1069137 - 1069607 | 18033.7 |
| long-chain-fatty-acid--coa ligase | EBF16_RS09080 | Not Available | - | 1069689 - 1071350 | 61193.4 |
| ompp1/fadl family transporter | EBF16_RS09085 | Not Available | - | 1071365 - 1072672 | 45754.7 |
| duf2147 domain-containing protein | EBF16_RS09090 | Not Available | - | 1072705 - 1073109 | 14615.5 |
| duf3422 family protein | EBF16_RS09095 | Not Available | - | 1073321 - 1073965 | 24101.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.