Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS29260 | Not Available | - | 1056208 - 1056351 | 5339.32 |
| globin domain-containing protein | EBF16_RS09005 | Not Available | - | 1056509 - 1056955 | 16280.6 |
| hypothetical protein | EBF16_RS09010 | Not Available | + | 1057329 - 1057667 | 12259.1 |
| cupin domain-containing protein | EBF16_RS09015 | Not Available | + | 1057683 - 1057988 | 11158.3 |
| is256 family transposase | EBF16_RS09020 | Not Available | + | 1058017 - 1059240 | 45818.3 |
| bifunctional diguanylate cyclase/phosphodiesterase | EBF16_RS09025 | Not Available | - | 1059541 - 1062279 | 100165.0 |
| pesticin immunity protein | EBF16_RS09030 | Not Available | - | 1062747 - 1063172 | 15245.4 |
| is5/is1182 family transposase | EBF16_RS09035 | Not Available | + | 1063435 - 1063590 | 5722.75 |
| is3 family transposase | EBF16_RS29265 | Not Available | + | 1063654 - 1064807 | 43654.6 |
| is5/is1182 family transposase | EBF16_RS09045 | Not Available | + | 1064836 - 1065261 | 15321.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.