Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspic/unbv domain-containing protein | EBF16_RS08845 | Not Available | + | 1018173 - 1018571 | 14314.3 |
| dicarboxylate/amino acid:cation symporter | EBF16_RS08850 | Not Available | - | 1019235 - 1020440 | 41885.9 |
| n-acetyl-d-glu racemase dgca | EBF16_RS08855 | Not Available | - | 1020457 - 1021449 | 34437.3 |
| n-acetyltransferase dgcn | EBF16_RS08860 | Not Available | - | 1021455 - 1022492 | 36383.7 |
| lysr family transcriptional regulator | EBF16_RS08865 | Not Available | - | 1022587 - 1023471 | 32402.1 |
| n-acyl-d-amino-acid deacylase family protein | EBF16_RS08870 | Not Available | + | 1023638 - 1025269 | 57335.6 |
| tonb-dependent receptor plug domain-containing protein | EBF16_RS08875 | Not Available | - | 1025519 - 1028335 | 99862.7 |
| penicillin acylase family protein | EBF16_RS08880 | Not Available | + | 1028801 - 1031182 | 87327.6 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | EBF16_RS08885 | Not Available | - | 1031186 - 1032628 | 50940.1 |
| serine hydrolase domain-containing protein | EBF16_RS08890 | Not Available | + | 1032747 - 1033946 | 42288.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.