Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | EBF16_RS08795 | Not Available | + | 1009766 - 1011100 | 47021.1 |
| amidohydrolase | EBF16_RS08800 | Not Available | + | 1011097 - 1012797 | 61490.9 |
| gnat family n-acetyltransferase | EBF16_RS08805 | Not Available | + | 1013035 - 1013508 | 18075.5 |
| amidohydrolase | EBF16_RS08810 | Not Available | + | 1013567 - 1015285 | 62069.4 |
| restriction endonuclease | EBF16_RS08815 | Not Available | + | 1015597 - 1016082 | 17728.2 |
| hypothetical protein | EBF16_RS08820 | Not Available | - | 1016092 - 1016379 | 10800.5 |
| type ii toxin-antitoxin system pard family antitoxin | EBF16_RS08825 | Not Available | + | 1016494 - 1016742 | 8847.83 |
| type ii toxin-antitoxin system rele/pare family toxin | EBF16_RS08830 | Not Available | + | 1016739 - 1017044 | 11199.5 |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | EBF16_RS08835 | Not Available | + | 1017434 - 1017862 | 15678.8 |
| res family nad+ phosphorylase | EBF16_RS08840 | Not Available | + | 1017859 - 1018146 | 10278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.