Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS08745 | Not Available | + | 1000489 - 1000674 | 6851.32 |
| entericidin a/b family lipoprotein | EBF16_RS08750 | Not Available | - | 1000724 - 1000852 | 4311.34 |
| Trna-val | Not Available | Not Available | + | 1000995 - 1001069 | Not Available |
| antitoxin xre/mbca/pars toxin-binding domain-containing protein | EBF16_RS08760 | Not Available | + | 1001556 - 1001984 | 15678.8 |
| res family nad+ phosphorylase | EBF16_RS08765 | Not Available | + | 1001981 - 1002418 | 15962.4 |
| is5/is1182 family transposase | EBF16_RS08770 | Not Available | + | 1002597 - 1002941 | 13281.3 |
| lysr substrate-binding domain-containing protein | EBF16_RS08775 | Not Available | - | 1003046 - 1003963 | 33970.8 |
| tonb-dependent receptor | EBF16_RS08780 | Not Available | + | 1004234 - 1006810 | 91069.4 |
| 4-aminobutyrate--2-oxoglutarate transaminase | EBF16_RS08785 | Not Available | + | 1006897 - 1008177 | 44864.1 |
| nad-dependent succinate-semialdehyde dehydrogenase | EBF16_RS08790 | Not Available | + | 1008174 - 1009661 | 52109.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.