Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | EBF16_RS08695 | Not Available | + | 988450 - 990039 | 56448.8 |
| alanine racemase | EBF16_RS08700 | Not Available | + | 990067 - 991110 | 37159.4 |
| acetyl-coa c-acetyltransferase | EBF16_RS08705 | Not Available | - | 991167 - 992339 | 39860.9 |
| alpha/beta fold hydrolase | EBF16_RS08710 | Not Available | - | 992390 - 993364 | 34872.9 |
| polyhydroxyalkanoate synthesis repressor phar | EBF16_RS08715 | Not Available | + | 993489 - 994067 | 21072.3 |
| hypothetical protein | EBF16_RS08720 | Not Available | + | 994074 - 994418 | 12842.1 |
| proline--trna ligase | EBF16_RS08725 | Not Available | + | 994508 - 996034 | 56759.9 |
| s9 family peptidase | EBF16_RS08730 | Not Available | - | 996184 - 998307 | 78972.1 |
| atp-dependent protease atpase subunit hslu | EBF16_RS08735 | Not Available | - | 998420 - 999721 | 47854.4 |
| atp-dependent protease subunit hslv | EBF16_RS08740 | Not Available | - | 999739 - 1000305 | 20192.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.