Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EBF16_RS08645 | Not Available | + | 974788 - 975684 | 32263.0 |
| tonb-dependent receptor | EBF16_RS08650 | Not Available | - | 975721 - 978177 | 87995.0 |
| helix-turn-helix domain-containing protein | EBF16_RS08655 | Not Available | - | 978423 - 979838 | 52464.9 |
| acyl-coa carboxylase subunit beta | EBF16_RS08660 | Not Available | + | 979979 - 981511 | 55515.7 |
| methylmalonyl-coa epimerase | EBF16_RS08665 | Not Available | + | 981626 - 982066 | 15705.9 |
| methylmalonyl-coa mutase | EBF16_RS08670 | Not Available | + | 982234 - 984387 | 77757.9 |
| biotin synthase biob | EBF16_RS08675 | Not Available | + | 984388 - 985401 | 36306.7 |
| hypothetical protein | EBF16_RS08680 | Not Available | + | 985535 - 985753 | 8081.24 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | EBF16_RS08685 | Not Available | + | 985827 - 987827 | 72232.8 |
| pp_00929 | EBF16_RS08690 | Not Available | + | 987944 - 988315 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.