Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | EBF16_RS08295 | Not Available | - | 901280 - 902170 | 31970.4 |
| trab/gumn family protein | EBF16_RS08300 | Not Available | - | 902175 - 903101 | 33196.1 |
| glycine--trna ligase subunit alpha | EBF16_RS08305 | Not Available | + | 903236 - 904135 | 34251.4 |
| endonuclease domain-containing protein | EBF16_RS08310 | Not Available | + | 904246 - 904599 | 12950.5 |
| glycine--trna ligase subunit beta | EBF16_RS08315 | Not Available | + | 904599 - 906800 | 79294.2 |
| pyruvate, phosphate dikinase | EBF16_RS08320 | Not Available | + | 906940 - 909639 | 96866.9 |
| hypothetical protein | EBF16_RS08325 | Not Available | - | 909702 - 910193 | 17664.0 |
| Trna-arg | Not Available | Not Available | + | 910332 - 910408 | Not Available |
| hypothetical protein | EBF16_RS08335 | Not Available | + | 910516 - 910695 | 7052.66 |
| hypothetical protein | EBF16_RS08340 | Not Available | + | 910788 - 910970 | 6929.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.