Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS29560 | Not Available | - | 866401 - 866535 | 4802.84 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | EBF16_RS08115 | Not Available | - | 866571 - 867977 | 52897.3 |
| glycoside hydrolase family 15 protein | EBF16_RS08120 | Not Available | - | 867974 - 869698 | 65200.5 |
| trehalose-phosphatase | EBF16_RS08125 | Not Available | - | 869842 - 870606 | 26331.8 |
| hypothetical protein | EBF16_RS28520 | Not Available | - | 870668 - 870838 | 6869.01 |
| lysr substrate-binding domain-containing protein | EBF16_RS08130 | Not Available | + | 870970 - 871890 | 33624.5 |
| type ii toxin-antitoxin system ccda family antitoxin | EBF16_RS08135 | Not Available | + | 871930 - 872160 | 8798.26 |
| dna topoisomerase iv subunit a | EBF16_RS08140 | Not Available | + | 872232 - 874559 | 85697.1 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EBF16_RS08145 | Not Available | + | 874628 - 876382 | 64618.0 |
| cca trna nucleotidyltransferase | EBF16_RS08150 | Not Available | - | 876346 - 877557 | 43373.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.