Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit c | EBF16_RS07925 | Not Available | + | 826775 - 827002 | 7361.16 |
| atpase | EBF16_RS07930 | Not Available | + | 827070 - 827564 | 17011.0 |
| atp synthase subunit b | EBF16_RS07935 | Not Available | + | 827557 - 828171 | 20972.2 |
| gnat family n-acetyltransferase | EBF16_RS07940 | Not Available | - | 828234 - 828758 | 19390.1 |
| had family hydrolase | EBF16_RS07945 | Not Available | - | 828829 - 829743 | 34125.8 |
| nad(p)-dependent alcohol dehydrogenase | EBF16_RS07950 | Not Available | - | 829886 - 830938 | 37186.4 |
| excinuclease abc subunit uvrc | EBF16_RS07955 | Not Available | + | 831181 - 833094 | 71290.5 |
| hypothetical protein | EBF16_RS07960 | Not Available | + | 833193 - 833498 | 10153.8 |
| methyl-accepting chemotaxis protein | EBF16_RS07965 | Not Available | + | 833495 - 835021 | 54697.8 |
| lysr family transcriptional regulator | EBF16_RS07970 | Not Available | - | 835018 - 835905 | 32497.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.