Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EBF16_RS07630 | Not Available | + | 763866 - 766382 | 88507.6 |
| transporter | EBF16_RS07635 | Not Available | - | 766399 - 767448 | 36589.0 |
| response regulator | EBF16_RS07640 | Not Available | + | 767750 - 768400 | 24140.2 |
| sensor histidine kinase | EBF16_RS07645 | Not Available | - | 768453 - 769610 | 42529.7 |
| outer membrane beta-barrel protein | EBF16_RS07650 | Not Available | + | 770271 - 771098 | 30158.9 |
| formylglycine-generating enzyme family protein | EBF16_RS07655 | Not Available | - | 771144 - 772058 | 34077.4 |
| yidh family protein | EBF16_RS07660 | Not Available | - | 772142 - 772519 | 13547.8 |
| duf2092 domain-containing protein | EBF16_RS07665 | Not Available | + | 773074 - 773838 | 27842.4 |
| hypothetical protein | EBF16_RS07670 | Not Available | + | 773835 - 774425 | 20462.6 |
| tonb-dependent receptor | EBF16_RS07675 | Not Available | - | 774524 - 777322 | 99689.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.