Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS07480 | Not Available | - | 731976 - 732335 | 13070.6 |
| aldehyde dehydrogenase family protein | EBF16_RS07485 | Not Available | + | 732440 - 733837 | 48084.1 |
| gamma-glutamylcyclotransferase family protein | EBF16_RS07490 | Not Available | + | 733854 - 734195 | 12687.1 |
| type ii toxin-antitoxin system vapc family toxin | EBF16_RS07495 | Not Available | - | 734196 - 734579 | 13351.1 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EBF16_RS07500 | Not Available | - | 734576 - 734827 | 8917.68 |
| nrde family protein | EBF16_RS07505 | Not Available | - | 734879 - 735643 | 27525.8 |
| Tmrna,resume consensus sequence (at 215): cacaagtgccaacgataa | Not Available | Not Available | + | 735694 - 736041 | Not Available |
| hypothetical protein | EBF16_RS07515 | Not Available | + | 736324 - 736704 | 13052.5 |
| hypothetical protein | EBF16_RS07520 | Not Available | + | 736957 - 738609 | 56484.5 |
| tonb-dependent receptor domain-containing protein | EBF16_RS07525 | Not Available | + | 738701 - 741400 | 98134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.