Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS07285 | Not Available | + | 687017 - 687382 | 12902.5 |
| is5/is1182 family transposase | EBF16_RS07290 | Not Available | + | 687502 - 687810 | 10976.0 |
| Trna-asn | Not Available | Not Available | + | 687968 - 688042 | Not Available |
| nad kinase | EBF16_RS07300 | Not Available | - | 688119 - 688895 | 28592.7 |
| gtp 3',8-cyclase moaa | EBF16_RS07305 | Not Available | - | 688892 - 689905 | 37023.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | EBF16_RS07310 | Not Available | + | 690027 - 692039 | 71800.0 |
| torf family putative porin | EBF16_RS07315 | Not Available | - | 692028 - 692765 | 25654.8 |
| hypothetical protein | EBF16_RS07320 | Not Available | - | 692752 - 693159 | 14453.1 |
| tetratricopeptide repeat protein | EBF16_RS07325 | Not Available | + | 693661 - 694797 | 40721.6 |
| hypothetical protein | EBF16_RS29250 | Not Available | + | 694860 - 695153 | 10349.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.