Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | EBF16_RS07130 | Not Available | - | 655330 - 656397 | 37487.2 |
| rna polymerase sigma factor | EBF16_RS07135 | Not Available | - | 656413 - 656946 | 20183.1 |
| tonb-dependent receptor domain-containing protein | EBF16_RS07140 | Not Available | - | 657005 - 659548 | 91300.0 |
| 16s ribosomal rna | Not Available | Not Available | + | 660263 - 661749 | Not Available |
| Trna-ile | Not Available | Not Available | + | 661926 - 662002 | Not Available |
| Trna-ala | Not Available | Not Available | + | 662014 - 662089 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 662391 - 665181 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 665358 - 665472 | Not Available |
| Trna-met | Not Available | Not Available | + | 665583 - 665659 | Not Available |
| abc transporter substrate-binding protein | EBF16_RS07185 | Not Available | + | 666101 - 667075 | 34753.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.