Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rrna maturation rnase ybey | EBF16_RS06785 | Not Available | - | 582258 - 582767 | 18361.3 |
| phoh family protein | EBF16_RS06790 | Not Available | - | 582792 - 583793 | 36051.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | EBF16_RS06795 | Not Available | - | 583895 - 585259 | 49732.2 |
| lysophospholipid acyltransferase family protein | EBF16_RS06800 | Not Available | - | 585269 - 586027 | 26966.1 |
| fur family transcriptional regulator | EBF16_RS06805 | Not Available | - | 586032 - 586454 | 16050.0 |
| mucr family transcriptional regulator | EBF16_RS06810 | Not Available | - | 586581 - 587006 | 15479.8 |
| gnat family n-acetyltransferase | EBF16_RS06815 | Not Available | - | 587118 - 587600 | 17765.7 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EBF16_RS06820 | Not Available | - | 587597 - 588223 | 21365.5 |
| nifu family protein | EBF16_RS06825 | Not Available | - | 588312 - 588890 | 20293.0 |
| pyridoxamine 5'-phosphate oxidase family protein | EBF16_RS06830 | Not Available | + | 588996 - 589466 | 17673.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.