Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | EBF16_RS06690 | Not Available | - | 560553 - 561566 | 36548.6 |
| mfs transporter | EBF16_RS06695 | Not Available | - | 561620 - 562906 | 47003.6 |
| aldehyde dehydrogenase iron-sulfur subunit paoa | EBF16_RS06700 | Not Available | + | 563298 - 563933 | 22192.8 |
| fad binding domain-containing protein | EBF16_RS06705 | Not Available | + | 563930 - 564880 | 33868.8 |
| aldehyde oxidoreductase molybdenum-binding subunit paoc | EBF16_RS06710 | Not Available | + | 564885 - 567086 | 77104.7 |
| cysteine hydrolase family protein | EBF16_RS06715 | Not Available | + | 567107 - 567706 | 21586.1 |
| abc transporter atp-binding protein | EBF16_RS06720 | Not Available | + | 567891 - 569573 | 61045.6 |
| efflux rnd transporter periplasmic adaptor subunit | EBF16_RS06725 | Not Available | + | 569570 - 570640 | 38933.5 |
| tolc family protein | EBF16_RS06730 | Not Available | + | 570643 - 572106 | 52509.4 |
| gnat family n-acetyltransferase | EBF16_RS06735 | Not Available | - | 572131 - 573318 | 43319.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.