Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | EBF16_RS06540 | Not Available | + | 524470 - 525585 | 40543.7 |
| duf952 domain-containing protein | EBF16_RS06545 | Not Available | - | 525629 - 525976 | 12629.2 |
| dna gyrase subunit a | EBF16_RS06550 | Not Available | - | 525973 - 528708 | 99654.7 |
| hypothetical protein | EBF16_RS06555 | Not Available | + | 528985 - 530256 | 43489.3 |
| tetratricopeptide repeat protein | EBF16_RS06560 | Not Available | + | 530363 - 531640 | 45430.0 |
| lrp/asnc family transcriptional regulator | EBF16_RS06565 | Not Available | - | 531736 - 532209 | 17079.8 |
| sensor histidine kinase | EBF16_RS06570 | Not Available | + | 532410 - 534143 | 61870.1 |
| polysaccharide deacetylase family protein | EBF16_RS06575 | Not Available | + | 534217 - 535257 | 37322.2 |
| Trna-met | Not Available | Not Available | + | 535284 - 535359 | Not Available |
| tyrosine-type recombinase/integrase | EBF16_RS06585 | Not Available | + | 535515 - 536873 | 50781.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.