Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | + | 508113 - 508188 | Not Available |
| Trna-ala | Not Available | Not Available | + | 508262 - 508337 | Not Available |
| Trna-ala | Not Available | Not Available | + | 508408 - 508483 | Not Available |
| atp-dependent helicase | EBF16_RS06455 | Not Available | - | 508831 - 511107 | 84578.5 |
| gfa family protein | EBF16_RS06460 | Not Available | + | 511221 - 511616 | 14178.6 |
| hypothetical protein | EBF16_RS06465 | Not Available | + | 511723 - 512064 | 11198.6 |
| rrf2 family transcriptional regulator | EBF16_RS06470 | Not Available | - | 512021 - 512515 | 16780.2 |
| globin domain-containing protein | EBF16_RS06475 | Not Available | + | 512622 - 513068 | 16002.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | EBF16_RS06480 | Not Available | - | 513084 - 513638 | 19633.5 |
| pseudouridine synthase | EBF16_RS06485 | Not Available | - | 513635 - 515134 | 54480.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.