Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor family protein | EBF16_RS06235 | Not Available | + | 464733 - 465497 | 27546.1 |
| fad-dependent oxidoreductase | EBF16_RS06240 | Not Available | + | 465498 - 467123 | 59473.1 |
| alpha/beta hydrolase | EBF16_RS06250 | Not Available | - | 467610 - 468266 | 24134.0 |
| cysteine desulfurase family protein | EBF16_RS06255 | Not Available | + | 468419 - 469453 | 35599.9 |
| cysteine desulfurase family protein | EBF16_RS06260 | Not Available | + | 469420 - 470538 | 38195.0 |
| 2fe-2s iron-sulfur cluster-binding protein | EBF16_RS06265 | Not Available | + | 470558 - 470893 | 11832.0 |
| class a beta-lactamase sgm-7 | EBF16_RS06270 | Not Available | + | 470897 - 471877 | 34452.6 |
| Ncrna_class:srp_rna | Not Available | Not Available | + | 471941 - 472038 | Not Available |
| dna polymerase iii subunit gamma/tau | EBF16_RS06280 | Not Available | + | 472146 - 473786 | 58539.6 |
| ybab/ebfc family nucleoid-associated protein | EBF16_RS06285 | Not Available | + | 473783 - 474106 | 11422.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.