Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycogen/starch/alpha-glucan phosphorylase | EBF16_RS06185 | Not Available | + | 451186 - 453651 | 92506.2 |
| 1,4-alpha-glucan branching protein glgb | EBF16_RS06190 | Not Available | + | 453691 - 455865 | 81253.9 |
| glucose-1-phosphate adenylyltransferase | EBF16_RS06195 | Not Available | + | 455914 - 457185 | 46862.8 |
| glycogen synthase glga | EBF16_RS06200 | Not Available | + | 457182 - 458633 | 51378.8 |
| glycogen debranching protein glgx | EBF16_RS06205 | Not Available | + | 458630 - 460534 | 68852.4 |
| paai family thioesterase | EBF16_RS06210 | Not Available | + | 460631 - 461263 | 22883.1 |
| gfo/idh/moca family protein | EBF16_RS06215 | Not Available | - | 461386 - 462450 | 37329.9 |
| hypothetical protein | EBF16_RS06220 | Not Available | - | 462471 - 462980 | 18390.0 |
| oxidoreductase | EBF16_RS06225 | Not Available | + | 463094 - 464119 | 36937.2 |
| sigma-70 family rna polymerase sigma factor | EBF16_RS06230 | Not Available | + | 464208 - 464729 | 19023.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.