Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | EBF16_RS06135 | Not Available | - | 436847 - 437320 | 16880.3 |
| duf3089 domain-containing protein | EBF16_RS06140 | Not Available | - | 437327 - 438451 | 40459.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | EBF16_RS06145 | Not Available | + | 438623 - 438910 | 10348.4 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | EBF16_RS06150 | Not Available | + | 439034 - 440518 | 51905.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | EBF16_RS06155 | Not Available | + | 440679 - 442184 | 54949.1 |
| autotransporter domain-containing protein | EBF16_RS06160 | Not Available | - | 442459 - 445674 | 107017.0 |
| tonb-dependent receptor domain-containing protein | EBF16_RS06165 | Not Available | - | 445777 - 448221 | 86551.7 |
| fecr family protein | EBF16_RS06170 | Not Available | - | 448205 - 449134 | 32784.8 |
| rna polymerase sigma factor | EBF16_RS06175 | Not Available | - | 449190 - 449702 | 19313.3 |
| serine hydrolase domain-containing protein | EBF16_RS06180 | Not Available | + | 449861 - 451066 | 44203.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.