Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase small subunit | EBF16_RS06085 | Not Available | - | 428571 - 429086 | 18593.5 |
| hypothetical protein | EBF16_RS06090 | Not Available | - | 429086 - 429433 | 13315.4 |
| acetolactate synthase 3 large subunit | EBF16_RS06095 | Not Available | - | 429430 - 431181 | 62709.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EBF16_RS06100 | Not Available | - | 431286 - 432230 | 34094.2 |
| phosphoserine phosphatase serb | EBF16_RS06105 | Not Available | + | 432340 - 433167 | 29018.0 |
| hypothetical protein | EBF16_RS06110 | Not Available | + | 433328 - 433585 | 8482.05 |
| l,d-transpeptidase family protein | EBF16_RS06115 | Not Available | + | 433654 - 435147 | 53885.4 |
| maue/doxx family redox-associated membrane protein | EBF16_RS06120 | Not Available | - | 435166 - 435915 | 27393.4 |
| merr family transcriptional regulator | EBF16_RS06125 | Not Available | + | 435994 - 436401 | 14713.6 |
| hypothetical protein | EBF16_RS06130 | Not Available | - | 436383 - 436547 | 6681.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.