Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | EBF16_RS05930 | Not Available | + | 401850 - 402326 | 17275.6 |
| rhomboid family intramembrane serine protease | EBF16_RS05935 | Not Available | + | 402331 - 402990 | 23299.2 |
| duf4170 domain-containing protein | EBF16_RS05940 | Not Available | - | 403054 - 403275 | 8207.93 |
| hypothetical protein | EBF16_RS05945 | Not Available | - | 403380 - 404033 | 22000.8 |
| hypothetical protein | EBF16_RS05950 | Not Available | - | 404026 - 404349 | 11710.1 |
| phage holin family protein | EBF16_RS05955 | Not Available | - | 404346 - 404720 | 13113.5 |
| hypothetical protein | EBF16_RS05960 | Not Available | - | 404786 - 405391 | 20448.3 |
| phosphopyruvate hydratase | EBF16_RS05965 | Not Available | + | 405618 - 406892 | 44840.3 |
| ftsb family cell division protein | EBF16_RS05970 | Not Available | + | 406983 - 407294 | 11657.5 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | EBF16_RS05975 | Not Available | + | 407525 - 408598 | 39240.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.