Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EBF16_RS05880 | Not Available | - | 388626 - 389672 | 36148.6 |
| aaa family atpase | EBF16_RS05885 | Not Available | - | 389923 - 390768 | 32057.9 |
| duf6975 family protein | EBF16_RS05890 | Not Available | - | 390868 - 391551 | 24523.3 |
| rna polymerase sigma factor rpod | EBF16_RS05895 | Not Available | - | 391772 - 393811 | 77282.2 |
| dna primase | EBF16_RS05900 | Not Available | - | 393855 - 395744 | 69067.5 |
| endonuclease domain-containing protein | EBF16_RS05905 | Not Available | - | 395746 - 396147 | 15497.7 |
| gatb/yqey domain-containing protein | EBF16_RS05910 | Not Available | - | 396225 - 396677 | 16411.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | EBF16_RS05915 | Not Available | + | 396831 - 398009 | 41404.2 |
| ribonuclease e inhibitor rrab | EBF16_RS05920 | Not Available | + | 398006 - 398374 | 13643.0 |
| carbamoyl-phosphate synthase large subunit | EBF16_RS05925 | Not Available | + | 398433 - 401768 | 119749.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.