Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium yanoikuyae str. Sphingobium yanoikuyae SJTF8
Accession NumberNZ_CP033230.1
Gene Summary
Adenine Count
917543 bp
Thymine Count
928555 bp
Guanine Count
1673236 bp
Cytosine Count
1653443 bp
Genome Length
5172777 bp
Protein-coding Genes
4749 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuon | EBF16_RS05830 | Not Available | + | 377643 - 379079 | 49329.3 |
| biotin--[acetyl-coa-carboxylase] ligase | EBF16_RS05835 | Not Available | + | 379124 - 379789 | 23404.3 |
| type iii pantothenate kinase | EBF16_RS05840 | Not Available | + | 379800 - 380582 | 27938.9 |
| ribonuclease j | EBF16_RS05845 | Not Available | + | 380579 - 382216 | 58411.6 |
| duf1467 family protein | EBF16_RS05850 | Not Available | + | 382436 - 382705 | 10032.3 |
| hypothetical protein | EBF16_RS05855 | Not Available | - | 382944 - 383468 | 19595.2 |
| vwa domain-containing protein | EBF16_RS05860 | Not Available | - | 384044 - 385219 | 45240.0 |
| methyl-accepting chemotaxis protein | EBF16_RS05865 | Not Available | + | 385366 - 386730 | 49230.2 |
| duf817 domain-containing protein | EBF16_RS05870 | Not Available | - | 386718 - 387572 | 32428.3 |
| duf3617 domain-containing protein | EBF16_RS05875 | Not Available | + | 387696 - 388565 | 30674.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.