Sphingomonas paucimobilis str. EPA505

RodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas paucimobilis str. EPA505 is a rod-shaped, nonsporulating bacterium that exhibits chemoheterotrophic metabolism, relying on organic compounds for energy and carbon sources. This strain is aerobic, indicating its requirement for oxygen in the metabolic processes that sustain its growth and proliferation. Sphingomonas paucimobilis is known to inhabit diverse environments, suggesting a versatile ecological adaptability that allows it to thrive in multiple habitats. The ability of Sphingomonas paucimobilis str. EPA505 to utilize a range of organic substrates may contribute to its ecological role in nutrient cycling and organic matter decomposition in various ecosystems. This trait positions the strain as a potential participant in bioremediation processes, where bacteria can degrade environmental pollutants. Thus, understanding the metabolic capabilities of S. paucimobilis str. EPA505 may provide insights into its functions within microbial communities and its potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas paucimobilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Sphingomonas paucimobilis str. EPA505

Accession NumberJFYY00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4692 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitBV96_04555Not Available+4669015 - 467034946702.9
putative uncharacterized protein precursorBV96_04556Not Available+4670409 - 467074711162.7
Portal proteinBV96_04557Not Available+4670971 - 467211339934.9
Hypothetical proteinBV96_04558Not Available+4672211 - 467253111301.2
Putative prohead proteaseBV96_04559Not Available+4672528 - 467293814359.2
Putative major capsid proteinBV96_04560Not Available+4673029 - 467414438831.0
hypothetical proteinBV96_04561Not Available+4674235 - 467477418984.0
hypothetical proteinBV96_04562Not Available+4674771 - 46749777392.86
Gp21BV96_04563Not Available+4674974 - 467538414548.5
putative uncharacterized protein precursorBV96_04564Not Available-4675370 - 467569311135.0

Displaying genes 1 – 10 of 4758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

259 records
Metabolite IDMetabolite nameStructureCAS number
BASm00041782-demethylmenaquinol-8C50H72O2Chemical structure of 2-demethylmenaquinol-8Not available
Average705.1055Da
Monoisotopic704.553231548Da
BASm0005442glycyl-L-asparagineC6H11N3O4Not availableNot available
Average189.171Da
Monoisotopic189.074955846Da
BASm0005445L-methionyl-L-alanineC8H16N2O3SChemical structure of L-methionyl-L-alanineNot available
Average220.29Da
Monoisotopic220.088163557Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0006316hydrogenobyrinateC45H60N4O14Chemical structure of hydrogenobyrinateNot available
Average880.989Da
Monoisotopic880.4106026Da
BASm0006855(R)-lipoateC8H14O2S2Chemical structure of (R)-lipoate1200-22-2
Average206.326Da
Monoisotopic206.0435211Da
BASm0008086validoxylamine AC14H25NO8Chemical structure of validoxylamine ANot available
Average335.3502Da
Monoisotopic335.1580168Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm0009937Adenosine diphosphate riboseC15H23N5O14P2Chemical structure of Adenosine diphosphate ribose20762-30-5
Average559.3157Da
Monoisotopic559.0716735Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 31–40 of 259 metabolites