Sphingomonas paucimobilis str. EPA505

RodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Sphingomonas paucimobilis str. EPA505 is a rod-shaped, nonsporulating bacterium that exhibits chemoheterotrophic metabolism, relying on organic compounds for energy and carbon sources. This strain is aerobic, indicating its requirement for oxygen in the metabolic processes that sustain its growth and proliferation. Sphingomonas paucimobilis is known to inhabit diverse environments, suggesting a versatile ecological adaptability that allows it to thrive in multiple habitats. The ability of Sphingomonas paucimobilis str. EPA505 to utilize a range of organic substrates may contribute to its ecological role in nutrient cycling and organic matter decomposition in various ecosystems. This trait positions the strain as a potential participant in bioremediation processes, where bacteria can degrade environmental pollutants. Thus, understanding the metabolic capabilities of S. paucimobilis str. EPA505 may provide insights into its functions within microbial communities and its potential applications in environmental biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas paucimobilis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Sphingomonas paucimobilis str. EPA505

Accession NumberJFYY00000000.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4692 genes

Non-Coding Genes

66 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Terminase large subunitBV96_04555Not Available+4669015 - 467034946702.9
putative uncharacterized protein precursorBV96_04556Not Available+4670409 - 467074711162.7
Portal proteinBV96_04557Not Available+4670971 - 467211339934.9
Hypothetical proteinBV96_04558Not Available+4672211 - 467253111301.2
Putative prohead proteaseBV96_04559Not Available+4672528 - 467293814359.2
Putative major capsid proteinBV96_04560Not Available+4673029 - 467414438831.0
hypothetical proteinBV96_04561Not Available+4674235 - 467477418984.0
hypothetical proteinBV96_04562Not Available+4674771 - 46749777392.86
Gp21BV96_04563Not Available+4674974 - 467538414548.5
putative uncharacterized protein precursorBV96_04564Not Available-4675370 - 467569311135.0

Displaying genes 1 – 10 of 4758 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

259 records
Metabolite IDMetabolite nameStructureCAS number
BASm0034668N6-Acetyl-LL-2,6-diaminoheptanedioateC9H14N2O5Chemical structure of N6-Acetyl-LL-2,6-diaminoheptanedioateNULL
Average230.221Da
Monoisotopic230.091368719Da
BASm0034669PhytoeneC40H64Chemical structure of PhytoeneNULL
Average544.9362Da
Monoisotopic544.500802048Da
BASm00346702-Methyl-1-hydroxypropyl-TPPC16H27N4O8P2SNot availableNULL
Average497.42Da
Monoisotopic497.101935436Da
BASm00346713-Methyl-1-hydroxybutyl-TPPC17H29N4O8P2SNot availableNULL
Average511.45Da
Monoisotopic511.1175855Da
BASm00346742-Methyl-1-hydroxybutyl-ThPPC17H29N4O8P2SChemical structure of 2-Methyl-1-hydroxybutyl-ThPPNULL
Average511.447Da
Monoisotopic511.118132638Da
BASm0034679BenzamideC7H7NOChemical structure of BenzamideNULL
Average121.1366Da
Monoisotopic121.052763851Da
BASm0034680Glycyl-L-tyrosineC11H14N2O4Chemical structure of Glycyl-L-tyrosineNULL
Average238.243Da
Monoisotopic238.095356939Da
BASm0034682P1,P4-Bis(5'-uridyl) tetraphosphateC18H26N4O23P4Chemical structure of P1,P4-Bis(5'-uridyl) tetraphosphateNULL
Average790.3071Da
Monoisotopic789.993829206Da
BASm0034685MucolactoneC6H6O4Chemical structure of MucolactoneNULL
Average142.11Da
Monoisotopic142.026608673Da

Displaying 251–259 of 259 metabolites