Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DKM28_RS02435 | Not Available | - | 588956 - 589819 | 33058.9 |
| abc transporter substrate-binding protein | DKM28_RS02440 | Not Available | - | 589797 - 591476 | 62091.3 |
| 30s ribosomal protein s6e | DKM28_RS02445 | Not Available | - | 592784 - 593194 | 14473.6 |
| translation initiation factor if-2 | DKM28_RS02450 | Not Available | - | 593315 - 595090 | 64874.5 |
| nucleoside-diphosphate kinase | DKM28_RS02455 | Not Available | - | 595248 - 595697 | 16140.4 |
| 50s ribosomal protein l24e | DKM28_RS02460 | Not Available | - | 595731 - 595919 | 7204.93 |
| 30s ribosomal protein s28e | DKM28_RS02465 | Not Available | - | 595939 - 596160 | 7888.58 |
| 50s ribosomal protein l7ae | DKM28_RS02470 | Not Available | - | 596185 - 596547 | 12727.4 |
| tatd family nuclease-associated radical sam protein | DKM28_RS02475 | Not Available | + | 596858 - 597511 | 24559.8 |
| wd40 repeat domain-containing protein | DKM28_RS02480 | Not Available | - | 597701 - 599185 | 53465.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.