Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin family protein | DKM28_RS04315 | Not Available | - | 1037046 - 1037294 | 9247.21 |
| amp-binding protein | DKM28_RS04320 | Not Available | - | 1037578 - 1039251 | 63403.7 |
| helix-turn-helix domain-containing protein | DKM28_RS04325 | Not Available | - | 1039413 - 1039967 | 21281.4 |
| is66-like element ismma13 family transposase | DKM28_RS04330 | Not Available | + | 1040536 - 1040846 | 11144.5 |
| hypc/hybg/hupf family hydrogenase formation chaperone | DKM28_RS04335 | Not Available | + | 1042025 - 1042285 | 9384.33 |
| transposase | DKM28_RS04340 | Not Available | - | 1042930 - 1044234 | 51928.5 |
| hydrogenase nickel incorporation protein hypb | DKM28_RS04345 | Not Available | + | 1046903 - 1047574 | 24830.2 |
| hypothetical protein | DKM28_RS04350 | Not Available | + | 1049219 - 1049495 | 10508.0 |
| gamma carbonic anhydrase family protein | DKM28_RS04355 | Not Available | + | 1049635 - 1050180 | 19543.1 |
| hypothetical protein | DKM28_RS04360 | Not Available | - | 1050784 - 1051236 | 16889.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.