Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | DKM28_RS03320 | Not Available | + | 798050 - 798727 | 26169.0 |
| indolepyruvate ferredoxin oxidoreductase subunit alpha | DKM28_RS03325 | Not Available | + | 799481 - 801352 | 66407.9 |
| indolepyruvate oxidoreductase subunit beta | DKM28_RS03330 | Not Available | + | 801349 - 802041 | 24260.5 |
| phenylacetate--coa ligase family protein | DKM28_RS03335 | Not Available | + | 802034 - 803341 | 48931.3 |
| flavodoxin family protein | DKM28_RS03340 | Not Available | + | 803857 - 804513 | 23874.7 |
| cdc48 family aaa atpase | DKM28_RS03345 | Not Available | + | 804600 - 806894 | 84639.0 |
| helix-turn-helix domain-containing protein | DKM28_RS03350 | Not Available | + | 807493 - 808056 | 20406.1 |
| pyridoxal-phosphate-dependent aminotransferase family protein | DKM28_RS03355 | Not Available | + | 808381 - 809532 | 41601.4 |
| riboflavin synthase | DKM28_RS03360 | Not Available | + | 809619 - 810083 | 17105.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | DKM28_RS03365 | Not Available | + | 810133 - 810537 | 14892.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.