Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase family protein | DKM28_RS13895 | Not Available | - | 3307745 - 3308041 | 10975.3 |
| glycosyltransferase | DKM28_RS13900 | Not Available | - | 3308461 - 3308661 | 7058.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DKM28_RS13905 | Not Available | + | 3309375 - 3309926 | 21029.1 |
| dtdp-glucose 4,6-dehydratase | DKM28_RS13910 | Not Available | + | 3310043 - 3310999 | 36162.9 |
| dtdp-4-dehydrorhamnose reductase | DKM28_RS13915 | Not Available | + | 3310972 - 3311781 | 30207.2 |
| is66-like element ismma13 family transposase | DKM28_RS13920 | Not Available | + | 3311778 - 3312062 | 10409.7 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | DKM28_RS13925 | Not Available | + | 3312282 - 3313349 | 39516.7 |
| acyltransferase family protein | DKM28_RS13930 | Not Available | + | 3313385 - 3313801 | 16605.5 |
| hypothetical protein | DKM28_RS18285 | Not Available | - | 3313812 - 3314565 | 28397.1 |
| glycosyltransferase family 4 protein | DKM28_RS13935 | Not Available | - | 3314569 - 3315636 | 40765.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.