Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose-1-phosphate isomerase | DKM28_RS13035 | Not Available | - | 3107237 - 3108256 | 37050.5 |
| inositol-3-phosphate synthase | DKM28_RS13040 | Not Available | + | 3108804 - 3109904 | 40541.7 |
| dna repair and recombination protein radb | DKM28_RS13045 | Not Available | - | 3110010 - 3110723 | 26031.3 |
| glutaredoxin family protein | DKM28_RS13050 | Not Available | + | 3111427 - 3111681 | 9434.38 |
| anaerobic ribonucleoside-triphosphate reductase | DKM28_RS13055 | Not Available | + | 3111761 - 3114145 | 90189.9 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | DKM28_RS13060 | Not Available | + | 3114190 - 3114981 | 29266.1 |
| thiamine-phosphate kinase | DKM28_RS13065 | Not Available | + | 3115731 - 3116744 | 36355.0 |
| s-layer protein domain-containing protein | DKM28_RS13070 | Not Available | + | 3116919 - 3120413 | 126232.0 |
| helix-turn-helix domain-containing protein | DKM28_RS13075 | Not Available | - | 3120525 - 3121046 | 18837.0 |
| abc transporter substrate-binding protein | DKM28_RS13080 | Not Available | + | 3121431 - 3122420 | 36221.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.