Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pilin n-terminal domain-containing protein | DKM28_RS12335 | Not Available | + | 2949573 - 2950049 | 16932.3 |
| type iv pilin n-terminal domain-containing protein | DKM28_RS12340 | Not Available | + | 2950338 - 2951315 | 36599.8 |
| hypothetical protein | DKM28_RS12345 | Not Available | + | 2951319 - 2952281 | 34915.4 |
| hypothetical protein | DKM28_RS12350 | Not Available | + | 2952318 - 2953751 | 53170.7 |
| formate dehydrogenase accessory sulfurtransferase fdhd | DKM28_RS12355 | Not Available | + | 2953770 - 2954558 | 29062.4 |
| imidazoleglycerol-phosphate dehydratase hisb | DKM28_RS12360 | Not Available | - | 2954622 - 2955197 | 20991.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DKM28_RS12365 | Not Available | - | 2955225 - 2955965 | 25742.2 |
| atp phosphoribosyltransferase | DKM28_RS12370 | Not Available | - | 2956052 - 2956921 | 31528.5 |
| methionine adenosyltransferase | DKM28_RS12375 | Not Available | + | 2957433 - 2958629 | 43934.7 |
| Trna-asp | Not Available | Not Available | + | 2959289 - 2959361 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.