Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | DKM28_RS08640 | Not Available | - | 2018875 - 2019393 | 20010.9 |
| nosd domain-containing protein | DKM28_RS08645 | Not Available | + | 2020010 - 2023561 | 127466.0 |
| mfs transporter | DKM28_RS08650 | Not Available | - | 2023794 - 2025050 | 45966.4 |
| nickel transporter permease | DKM28_RS08655 | Not Available | - | 2025176 - 2026009 | 29856.2 |
| nickel abc transporter permease | DKM28_RS08660 | Not Available | - | 2025993 - 2026937 | 34377.0 |
| abc transporter substrate-binding protein | DKM28_RS08665 | Not Available | - | 2027011 - 2028609 | 60042.2 |
| abc transporter atp-binding protein | DKM28_RS08670 | Not Available | - | 2028675 - 2029661 | 36101.8 |
| abc transporter atp-binding protein | DKM28_RS08675 | Not Available | - | 2029654 - 2030586 | 34345.3 |
| dicarboxylate/amino acid:cation symporter | DKM28_RS08680 | Not Available | + | 2031562 - 2033115 | 55436.2 |
| aldehyde ferredoxin oxidoreductase family protein | DKM28_RS08685 | Not Available | - | 2033321 - 2035087 | 65198.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.