Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypoxanthine/guanine phosphoribosyltransferase | DKM28_RS06910 | Not Available | + | 1605986 - 1606555 | 20651.4 |
| diphthamide biosynthesis enzyme dph2 | DKM28_RS06915 | Not Available | + | 1606536 - 1607543 | 37062.9 |
| mettl5 family protein | DKM28_RS06920 | Not Available | + | 1607627 - 1608220 | 22166.8 |
| exosome complex rna-binding protein csl4 | DKM28_RS06925 | Not Available | + | 1608523 - 1609473 | 35201.8 |
| dna-directed rna polymerase subunit l | DKM28_RS06930 | Not Available | + | 1609610 - 1609888 | 10371.6 |
| o-phospho-l-seryl-trna:cys-trna synthase | DKM28_RS06935 | Not Available | + | 1610193 - 1611353 | 42299.7 |
| winged helix-turn-helix domain-containing protein | DKM28_RS06940 | Not Available | - | 1611519 - 1611857 | 13343.9 |
| ferredoxin domain-containing protein | DKM28_RS06945 | Not Available | + | 1612096 - 1612650 | 19974.4 |
| diaminopimelate decarboxylase | DKM28_RS06950 | Not Available | - | 1612862 - 1614124 | 47047.9 |
| hypothetical protein | DKM28_RS17850 | Not Available | + | 1614339 - 1614506 | 6490.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.