Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina mazei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 30 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Lithotroph |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina mazei str. JL01
Accession NumberNZ_CP029709.1
Gene Summary
Adenine Count
1199378 bp
Thymine Count
1211318 bp
Guanine Count
858150 bp
Cytosine Count
858176 bp
Genome Length
4186733 bp
Protein-coding Genes
3530 genes
Non-Coding Genes
70 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DKM28_RS06775 | Not Available | - | 1565960 - 1567273 | 47399.1 |
| vms1/ankzf1 family peptidyl-trna hydrolase | DKM28_RS06780 | Not Available | + | 1568158 - 1569201 | 39183.8 |
| yoak family protein | DKM28_RS06785 | Not Available | + | 1569718 - 1570575 | 30685.7 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase | DKM28_RS06790 | Not Available | + | 1570633 - 1571439 | 29745.4 |
| histidinol phosphate phosphatase domain-containing protein | DKM28_RS06795 | Not Available | + | 1571593 - 1572240 | 23332.8 |
| hypothetical protein | DKM28_RS17840 | Not Available | - | 1572406 - 1572576 | 6044.46 |
| pgf-pre-pgf domain-containing protein | DKM28_RS06800 | Not Available | + | 1572967 - 1575273 | 81698.0 |
| pkd domain-containing protein | DKM28_RS06805 | Not Available | + | 1575610 - 1577673 | 76548.4 |
| hypothetical protein | DKM28_RS06810 | Not Available | - | 1577709 - 1579646 | 71604.7 |
| type ii/iv secretion system atpase subunit | DKM28_RS06815 | Not Available | - | 1579660 - 1582095 | 89936.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.