Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfotransferase family 2 domain-containing protein | KR76_RS03455 | Not Available | - | 720857 - 721477 | 23896.5 |
| rossmann-like and duf2520 domain-containing protein | KR76_RS03460 | Not Available | + | 721701 - 722612 | 31066.4 |
| pantoate--beta-alanine ligase | KR76_RS03465 | Not Available | + | 722609 - 723487 | 31132.3 |
| aspartate 1-decarboxylase | KR76_RS03470 | Not Available | + | 723506 - 723925 | 14718.6 |
| l-aspartate oxidase | KR76_RS03475 | Not Available | + | 723951 - 725621 | 58449.3 |
| carboxylating nicotinate-nucleotide diphosphorylase | KR76_RS03480 | Not Available | + | 725618 - 726532 | 31734.8 |
| type iii pantothenate kinase | KR76_RS03485 | Not Available | + | 726535 - 727320 | 27511.3 |
| histone-like nucleoid-structuring protein lsr2 | KR76_RS03490 | Not Available | + | 727521 - 727865 | 11814.6 |
| atp-dependent clp protease atp-binding subunit | KR76_RS03495 | Not Available | + | 728029 - 730608 | 94415.0 |
| a/g-specific adenine glycosylase | KR76_RS03500 | Not Available | - | 730749 - 731618 | 31334.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.