Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | KR76_RS03255 | Not Available | + | 671179 - 671748 | 20288.3 |
| inorganic diphosphatase | KR76_RS03260 | Not Available | - | 671817 - 672305 | 18449.8 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | KR76_RS03265 | Not Available | + | 672443 - 673912 | 50135.3 |
| zinc-dependent metalloprotease | KR76_RS03270 | Not Available | + | 673962 - 675011 | 37719.5 |
| trna lysidine(34) synthetase tils | KR76_RS03275 | Not Available | + | 675014 - 675997 | 34035.6 |
| hypoxanthine phosphoribosyltransferase | KR76_RS03280 | Not Available | + | 676002 - 676553 | 20292.4 |
| atp-dependent zinc metalloprotease ftsh | KR76_RS03285 | Not Available | + | 676718 - 678784 | 74012.8 |
| gtp cyclohydrolase i fole | KR76_RS03290 | Not Available | + | 678792 - 679412 | 22488.2 |
| sugar nucleotide-binding protein | KR76_RS03295 | Not Available | - | 679428 - 680828 | 49724.4 |
| dtdp-glucose 4,6-dehydratase | KR76_RS03300 | Not Available | - | 680837 - 681832 | 36722.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.