Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | KR76_RS02575 | Not Available | + | 529982 - 530629 | 22740.2 |
| amino acid abc transporter permease | KR76_RS02580 | Not Available | + | 530631 - 531365 | 26411.5 |
| substrate-binding periplasmic protein | KR76_RS02585 | Not Available | + | 531362 - 532207 | 29001.3 |
| nad(p)/fad-dependent oxidoreductase | KR76_RS02590 | Not Available | + | 532292 - 533599 | 46690.8 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | KR76_RS02595 | Not Available | + | 533678 - 534808 | 39988.4 |
| l-threonine 3-dehydrogenase | KR76_RS02600 | Not Available | + | 534817 - 535860 | 36185.6 |
| llm class f420-dependent oxidoreductase | KR76_RS02605 | Not Available | + | 535942 - 537000 | 38611.2 |
| crotonase/enoyl-coa hydratase family protein | KR76_RS02610 | Not Available | + | 536997 - 537815 | 28214.6 |
| duf4031 domain-containing protein | KR76_RS02615 | Not Available | - | 537802 - 538101 | 10805.0 |
| c40 family peptidase | KR76_RS28815 | Not Available | - | 538121 - 538651 | 18853.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.