Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pimelobacter simplex str. VKM Ac-2033D
Accession NumberNZ_CP009896.1
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | KR76_RS27165 | Not Available | - | 5539947 - 5540903 | 34074.2 |
| d-alanine--d-alanine ligase | KR76_RS27170 | Not Available | - | 5540900 - 5541856 | 33159.6 |
| alanine racemase | KR76_RS27175 | Not Available | - | 5541853 - 5543010 | 39526.5 |
| m15 family metallopeptidase | KR76_RS27180 | Not Available | - | 5543007 - 5543630 | 22022.3 |
| hnh endonuclease signature motif containing protein | KR76_RS28720 | Not Available | + | 5543763 - 5545178 | 50222.8 |
| duf4153 domain-containing protein | KR76_RS27190 | Not Available | - | 5545221 - 5547803 | 88918.4 |
| response regulator transcription factor | KR76_RS27195 | Not Available | - | 5547800 - 5548498 | 25190.3 |
| duf418 domain-containing protein | KR76_RS27200 | Not Available | - | 5548614 - 5549768 | 40513.1 |
| polysaccharide deacetylase family protein | KR76_RS28725 | Not Available | - | 5549787 - 5551247 | 52703.8 |
| sigma-70 family rna polymerase sigma factor | KR76_RS27210 | Not Available | - | 5551289 - 5552191 | 32848.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.